ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1in4A1 - ECOD Domain | ECOD

ECOD/Domains/e1in4A1

e1in4A1

UID: 000002621

RepresentativePDB

Range: A:255-329
PDB: 1IN4 chain A(all domains)
UniProt: Q56313 (all domains)
Gene: ruvB

Molecule: HOLLIDAY JUNCTION DNA HELICASE RUVB

3D Structure

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Related Domains

Browse other domains in RuvB_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRuvB_C(101.1.2.71)

Ligands

in contact, ≤ 4 Å

Hexane-1,6-DiolHEZ
drugDrugBank DB02210
COBALT (II) IONCO
metalwithin 5 Å only

+ 1 additive (Acetate)

Pfam Families

PF05491WHD_RuvB

RuvB C-terminal winged helix domain

ClanCL0123HTH

External Links

ECOD PDB View: 1IN4 RCSB PDB: 1IN4 PDBe: 1IN4 UniProt: Q56313

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.