ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6lxsA1 - ECOD Domain | ECOD

ECOD/Domains/e6lxsA1

e6lxsA1

UID: 002624934

PDB

Range: A:6-159
PDB: 6LXS chain A(all domains)
UniProt: Q2UWJ6 (all domains)
Gene: sdrC

Molecule: Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein

3D Structure

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Related Domains

Browse other domains in Big_8 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyBig_8(11.1.5.48)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial Ig domain

ClanCL0159E-set

External Links

ECOD PDB View: 6LXS RCSB PDB: 6LXS PDBe: 6LXS UniProt: Q2UWJ6

Downloads

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