ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6r8cA1 - ECOD Domain | ECOD

ECOD/Domains/e6r8cA1

e6r8cA1

UID: 002625967

PDB

Range: A:1-147
PDB: 6R8C chain A(all domains)
UniProt: B6DRA0 (all domains)
Gene: gag

Molecule: Gag polyprotein

3D Structure

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Related Domains

Browse other domains in Gag_p24 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyGag_p24(170.2.1.1)

Ligands

in contact, ≤ 4 Å

MYO-INOSITOL-(1,3,4,5,6)-PENTAKISPHOSPHATE5MY

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00607Gag_p24

gag protein p24 N-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 6R8C RCSB PDB: 6R8C PDBe: 6R8C UniProt: B6DRA0

Downloads

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