ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yb4AAA1 - ECOD Domain | ECOD

ECOD/Domains/e6yb4AAA1

e6yb4AAA1

UID: 002626056

PDB

Range: AAA:979-1108
PDB: 6YB4 chain AAA(all domains)
UniProt: Q6PL18 (all domains)
Gene: ATAD2

Molecule: ATPase family AAA domain-containing protein 2

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

~{N}-[4-bromanyl-3-[(3~{S})-3-methylpyrrolidin-1-yl]sulfonyl-phenyl]-2-[(4~{R})-4-cyclopropyl-4-methyl-2,5-bis(oxidanylidene)imidazolidin-1-yl]ethanamideOJH

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 6YB4 RCSB PDB: 6YB4 PDBe: 6YB4 UniProt: Q6PL18

Downloads

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1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.