ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6q01D1 - ECOD Domain | ECOD

ECOD/Domains/e6q01D1

e6q01D1

UID: 002627281

PDB

Range: D:22-66
PDB: 6Q01 chain D(all domains)
UniProt: O95551 (all domains)
Gene: TDP2

Molecule: Tyrosyl-DNA phosphodiesterase 2

3D Structure

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Related Domains

Browse other domains in UBA_4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyUBA_4(103.1.1.14)

Ligands

in contact, ≤ 4 Å

Benzoic acidBEZ
drugDrugBank DB03793
Potassium ionK
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

UBA-like domain

ClanCL0214UBA

External Links

ECOD PDB View: 6Q01 RCSB PDB: 6Q01 PDBe: 6Q01 UniProt: O95551

Downloads

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