ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vy2E3 - ECOD Domain | ECOD

ECOD/Domains/e6vy2E3

e6vy2E3

UID: 002627580

PDB

Range: E:256-473
PDB: 6VY2 chain E(all domains)
UniProt: A0A0A7I3C6 (all domains)
Gene: env

Molecule: Glycoprotein 120

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L31e-like(259)

HH-groupRibosomal protein L31e/gp120 outer domain(259.1)

TT-groupRibosomal protein L31e/gp120 outer domain(259.1.1)

FFamilyGP120(259.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 6VY2 RCSB PDB: 6VY2 PDBe: 6VY2 UniProt: A0A0A7I3C6

Downloads

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