ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wtcB1 - ECOD Domain | ECOD

ECOD/Domains/e6wtcB1

e6wtcB1

UID: 002628834

PDB

Range: B:79-194
PDB: 6WTC chain B(all domains)
UniProt: P0DTD1 (all domains)
Gene: rep

Molecule: Non-structural protein 8

3D Structure

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Related Domains

Browse other domains in CoV_NSP8 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupCoronavirus NSP8-like(4315)

HH-groupCoronavirus NSP8-like(4315.1)

TT-groupCoronavirus NSP8-like(4315.1.1)

FFamilyCoV_NSP8(4315.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetic acid)

Acetic acidACY
DrugBank DB03166

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08717CoV_NSP8

Coronavirus replicase NSP8

External Links

ECOD PDB View: 6WTC RCSB PDB: 6WTC PDBe: 6WTC UniProt: P0DTD1

Downloads

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