ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6krlA2 - ECOD Domain | ECOD

ECOD/Domains/e6krlA2

e6krlA2

UID: 002630064

PDB

Range: A:35-382
PDB: 6KRL chain A(all domains)
UniProt: A0A510NXC4 (all domains)
Gene: TCE0_018f06110

Molecule: Mating factor alpha,GH30 Xylanase B

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_30 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_30(2002.1.1.85)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF02055Glyco_hydro_30

Glycosyl hydrolase family 30 TIM-barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6KRL RCSB PDB: 6KRL PDBe: 6KRL UniProt: A0A510NXC4

Downloads

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Drug annotations from DrugDomain.