ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kyaB2 - ECOD Domain | ECOD

ECOD/Domains/e6kyaB2

e6kyaB2

UID: 002630193

PDB

Range: B:433-434,B:461-818
PDB: 6KYA chain B(all domains)
UniProt: Q9NR97 (all domains)
Gene: TLR8

Molecule: Toll-like receptor 8

3D Structure

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Related Domains

Browse other domains in LRR_1,LRR_8 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1,LRR_8(207.1.1.55)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
3-[5-methylsulfanyl-4-(3,4,5-trimethylphenyl)-1,2,4-triazol-3-yl]propan-1-olDY3

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

Leucine rich repeat

ClanCL0022LRR

External Links

ECOD PDB View: 6KYA RCSB PDB: 6KYA PDBe: 6KYA UniProt: Q9NR97

Downloads

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