ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6l4u11 - ECOD Domain | ECOD

ECOD/Domains/e6l4u11

e6l4u11

UID: 002630264

PDB

Range: 1:65-127,1:149-226
PDB: 6L4U chain 1(all domains)

Molecule: Fucoxanthin chlorophyll a/c-binding protein Lhcr15

3D Structure

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Related Domains

Browse other domains in Chloroa_b-bind →

Classification

AArchitectureextended segments(a.20)

XX-groupChlorophyll a-b binding protein(5077)

HH-groupChlorophyll a-b binding protein(5077.1)

TT-groupChlorophyll a-b binding protein(5077.1.1)

FFamilyChloroa_b-bind(5077.1.1.1)

Ligands

in contact, ≤ 4 Å

(3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'-yl acetateA86
Beta-caroteneBCR
Chlorophyll aCLA
(3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diolDD6
Chlorophyll c1KC1

+ 1 additive (Dodecyl-beta-d-maltoside)

Pfam Families

PF00504Chloroa_b-bind

Chlorophyll A-B binding protein

External Links

ECOD PDB View: 6L4U RCSB PDB: 6L4U PDBe: 6L4U

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer.