ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6lgbA1 - ECOD Domain | ECOD

ECOD/Domains/e6lgbA1

e6lgbA1

UID: 002630331

PDB

Range: A:42-275,A:295-519
PDB: 6LGB chain A(all domains)
UniProt: H9J974 (all domains)

Molecule: Sucrose hydrolase

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
alpha-D-glucopyranoseGLC
Magnesium ionMG

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6LGB RCSB PDB: 6LGB PDBe: 6LGB UniProt: H9J974

Downloads

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metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.