ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6lumK2 - ECOD Domain | ECOD

ECOD/Domains/e6lumK2

e6lumK2

UID: 002630637

PDB

Range: K:133-260
PDB: 6LUM chain K(all domains)
UniProt: A0QT07 (all domains)
Gene: sdhB

Molecule: Succinate dehydrogenase subunit B

3D Structure

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Related Domains

Browse other domains in Fer4_10 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupalpha-helical ferredoxin-like(187)

HH-groupalpha-helical ferredoxin(187.1)

TT-groupalpha-helical ferredoxin(187.1.1)

FFamilyFer4_10(187.1.1.3)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
FE3-S4 CLUSTERF3S
(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATEPEV

Pfam Families

PF13237Fer4_10

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 6LUM RCSB PDB: 6LUM PDBe: 6LUM UniProt: A0QT07

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.