ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6o9wB1 - ECOD Domain | ECOD

ECOD/Domains/e6o9wB1

e6o9wB1

UID: 002631029

PDB

Range: B:385-480
PDB: 6O9W chain B(all domains)
UniProt: P18357 (all domains)
Gene: blaR1

Molecule: Regulatory protein BlaR1

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyTranspeptidase(4019.1.1.3)

Ligands

in contact, ≤ 4 Å

(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamideNXL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 6O9W RCSB PDB: 6O9W PDBe: 6O9W UniProt: P18357

Downloads

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