ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5rbzA1 - ECOD Domain | ECOD

ECOD/Domains/e5rbzA1

e5rbzA1

UID: 002633478

PDB

Range: A:1-178
PDB: 5RBZ chain A(all domains)
UniProt: P11838 (all domains)
Gene: EAPA

Molecule: Endothiapepsin

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

2-(2-methylphenyl)acetamideR9S

+ 2 additives (Dimethyl sulfoxide, Tetraethylene glycol)

Dimethyl sulfoxideDMS
DrugBank DB01093
Tetraethylene glycolPG4

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 5RBZ RCSB PDB: 5RBZ PDBe: 5RBZ UniProt: P11838

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.