ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5rhmA2 - ECOD Domain | ECOD

ECOD/Domains/e5rhmA2

e5rhmA2

UID: 002633708

PDB

Range: A:183-319
PDB: 5RHM chain A(all domains)
UniProt: Q32ZE1 (all domains)

Molecule: NS3 Helicase

3D Structure

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Related Domains

Browse other domains in Flavi_DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyFlavi_DEAD(2004.1.1.151)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives ((4r)-2-Methylpentane-2,4-Diol, Phosphate ion, 1,2-ETHANEDIOL)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
Phosphate ionPO4
1,2-ETHANEDIOLEDO

Pfam Families

PF07652Flavi_DEAD

Flavivirus DEAD domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5RHM RCSB PDB: 5RHM PDBe: 5RHM UniProt: Q32ZE1

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.