ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6ro0F1 - ECOD Domain | ECOD

ECOD/Domains/e6ro0F1

e6ro0F1

UID: 002633834

PDB

Range: F:2-99
PDB: 6RO0 chain F(all domains)
UniProt: P04981 (all domains)
Gene: ptxE

Molecule: Pertussis toxin subunit 5

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pertus-S5-tox →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupBacterial enterotoxins(2.2)

TT-groupBacterial enterotoxins(2.2.1)

FFamilyPertus-S5-tox(2.2.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09276Pertus-S5-tox

Pertussis toxin S5 subunit

ClanCL0658OB_enterotoxin

External Links

ECOD PDB View: 6RO0 RCSB PDB: 6RO0 PDBe: 6RO0 UniProt: P04981

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure