ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rqzA1 - ECOD Domain | ECOD

ECOD/Domains/e6rqzA1

e6rqzA1

UID: 002633867

PDB

Range: A:646-928
PDB: 6RQZ chain A(all domains)
UniProt: Q24451 (all domains)
Gene: alpha-Man-IIa

Molecule: Alpha-mannosidase 2

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_38C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupsupersandwich(12.3)

TT-groupsupersandwich(12.3.1)

FFamilyGlyco_hydro_38C(12.3.1.13)

Ligands

in contact, ≤ 4 Å

Succinic acidSIN
drugDrugBank DB00139
(1~{R},2~{S},3~{R},4~{R},5~{S},6~{R})-5-azanyl-6-(hydroxymethyl)cyclohexane-1,2,3,4-tetrolKGH

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF07748Glyco_hydro_38C

Glycosyl hydrolases family 38 C-terminal domain

ClanCL0103Gal_mutarotase

External Links

ECOD PDB View: 6RQZ RCSB PDB: 6RQZ PDBe: 6RQZ UniProt: Q24451

Downloads

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1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.