ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6s0vE1 - ECOD Domain | ECOD

ECOD/Domains/e6s0vE1

e6s0vE1

UID: 002634127

PDB

Range: E:3-273
PDB: 6S0V chain E(all domains)
UniProt: Q6L732 (all domains)
Gene: kanJ

Molecule: Kanamycin B dioxygenase

3D Structure

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Related Domains

Browse other domains in PhyH →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyPhyH(10.12.1.25)

Ligands

in contact, ≤ 4 Å

NeamineXXX
drugDrugBank DB04808
NICKEL (II) IONNI
metal

+ 1 additive (Sulfate ion)

Pfam Families

Phytanoyl-CoA dioxygenase (PhyH)

ClanCL0029Cupin

External Links

ECOD PDB View: 6S0V RCSB PDB: 6S0V PDBe: 6S0V UniProt: Q6L732

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.