ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6smpD1 - ECOD Domain | ECOD

ECOD/Domains/e6smpD1

e6smpD1

UID: 002634724

PDB

Range: D:5-76
PDB: 6SMP chain D(all domains)
UniProt: Q7MZT5 (all domains)
Gene: plu4189

Molecule: Acyl carrier protein

3D Structure

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Related Domains

Browse other domains in PP-binding →

Classification

AArchitecturealpha bundles(a.7)

XX-groupACP-like(132)

HH-groupAcyl-carrier protein (ACP)(132.1)

TT-groupAcyl-carrier protein (ACP)(132.1.1)

FFamilyPP-binding(132.1.1.1)

Ligands

in contact, ≤ 4 Å

(2~{R})-3,3-dimethyl-2-oxidanyl-~{N}-[3-oxidanylidene-3-[2-[(1~{R},4~{Z},6~{Z},8~{Z})-1,5,7,9-tetrakis(oxidanyl)-3,11-bis(oxidanylidene)dodeca-4,6,8-trienyl]sulfanylethylamino]propyl]-4-[tris(oxidanyl)-$l^{5}-phosphanyl]oxy-butanamideLLE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00550PP-binding

Phosphopantetheine attachment site

ClanCL0314PP-binding

External Links

ECOD PDB View: 6SMP RCSB PDB: 6SMP PDBe: 6SMP UniProt: Q7MZT5

Downloads

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