ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6v0aA1 - ECOD Domain | ECOD

ECOD/Domains/e6v0aA1

e6v0aA1

UID: 002636209

PDB

Range: A:35-480
PDB: 6V0A chain A(all domains)
UniProt: B3E641 (all domains)
Gene: Glov_1042

Molecule: Nitrite reductase (cytochrome; ammonia-forming)

3D Structure

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Related Domains

Browse other domains in Cytochrom_C552 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupMultiheme cytochromes(139)

HH-groupDi-heme elbow motif(139.2)

TT-groupDi-heme elbow motif(139.2.1)

FFamilyCytochrom_C552(139.2.1.1)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF02335Cytochrom_C552

Cytochrome c552

ClanCL0317Multiheme_cytos

External Links

ECOD PDB View: 6V0A RCSB PDB: 6V0A PDBe: 6V0A UniProt: B3E641

Downloads

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Drug annotations from DrugDomain.