ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vcfA1 - ECOD Domain | ECOD

ECOD/Domains/e6vcfA1

e6vcfA1

UID: 002636398

PDB

Range: A:7-472
PDB: 6VCF chain A(all domains)
UniProt: A0A128A3G4 (all domains)
Gene: NDEV_1113

Molecule: carotenoid cleavage dioxygenase

3D Structure

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Related Domains

Browse other domains in RPE65 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRPE65(5.1.4.15)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
FE (II) IONFE2
metal
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

Retinal pigment epithelial membrane protein

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6VCF RCSB PDB: 6VCF PDBe: 6VCF UniProt: A0A128A3G4

Downloads

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Drug annotations from DrugDomain.