ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vchD1 - ECOD Domain | ECOD

ECOD/Domains/e6vchD1

e6vchD1

UID: 002636413

PDB

Range: D:7-472
PDB: 6VCH chain D(all domains)
UniProt: A0A128A3G4 (all domains)
Gene: NDEV_1113

Molecule: carotenoid cleavage dioxygenase

3D Structure

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Related Domains

Browse other domains in RPE65 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRPE65(5.1.4.15)

Ligands

in contact, ≤ 4 Å

COBALT (II) IONCO
metal
Sodium ionNA
metal
(2E,4E,6E,8E,10E)-11-[(4R)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-5,9-dimethylundeca-2,4,6,8,10-pentaenalQVM

Pfam Families

Retinal pigment epithelial membrane protein

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6VCH RCSB PDB: 6VCH PDBe: 6VCH UniProt: A0A128A3G4

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.