ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vkoB1 - ECOD Domain | ECOD

ECOD/Domains/e6vkoB1

e6vkoB1

UID: 002636552

PDB

Range: B:782-1011
PDB: 6VKO chain B(all domains)
UniProt: P09874 (all domains)
Gene: PARP1

Molecule: Poly [ADP-ribose] polymerase 1

3D Structure

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Related Domains

Browse other domains in PARP →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupADP-ribosylation(237)

HH-groupADP-ribosylation(237.1)

TT-groupADP-ribosylation(237.1.1)

FFamilyPARP(237.1.1.1)

Ligands

in contact, ≤ 4 Å

methyl 2-{4-[4-(7-carbamoyl-1H-benzimidazol-2-yl)benzene-1-carbonyl]piperazin-1-yl}pyrimidine-5-carboxylateL1S

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Poly(ADP-ribose) polymerase catalytic domain

ClanCL0084ADP-ribosyl

External Links

ECOD PDB View: 6VKO RCSB PDB: 6VKO PDBe: 6VKO UniProt: P09874

Downloads

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