ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vksC5 - ECOD Domain | ECOD

ECOD/Domains/e6vksC5

e6vksC5

UID: 002636586

PDB

Range: C:1-37,C:329-496
PDB: 6VKS chain C(all domains)
UniProt: Q5F725 (all domains)
Gene: NGO_1364

Molecule: Efflux pump membrane transporter

3D Structure

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Related Domains

Browse other domains in ACR_tran →

Classification

AArchitecturealpha bundles(a.7)

XX-groupMultidrug efflux transporter AcrB transmembrane domain(5067)

HH-groupMultidrug efflux transporter AcrB transmembrane domain(5067.1)

TT-groupMultidrug efflux transporter AcrB transmembrane domain(5067.1.1)

FFamilyACR_tran(5067.1.1.1)

Ligands

in contact, ≤ 4 Å

PhosphatidylethanolaminePTY

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00873ACR_tran

AcrB/AcrD/AcrF family

ClanCL0322RND_permease

External Links

ECOD PDB View: 6VKS RCSB PDB: 6VKS PDBe: 6VKS UniProt: Q5F725

Downloads

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