ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vxoA1 - ECOD Domain | ECOD

ECOD/Domains/e6vxoA1

e6vxoA1

UID: 002637043

PDB

Range: A:15-240
PDB: 6VXO chain A(all domains)
UniProt: Q15858 (all domains)
Gene: SCN9A

Molecule: NaChBac-Nav1.7VSDII chimera

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphatePOV

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 6VXO RCSB PDB: 6VXO PDBe: 6VXO UniProt: Q15858

Downloads

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