ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6w1qI1 - ECOD Domain | ECOD

ECOD/Domains/e6w1qI1

e6w1qI1

UID: 002637275

PDB

Range: I:1-36
PDB: 6W1Q chain I(all domains)
UniProt: Q8DJZ6 (all domains)
Gene: psbI

Molecule: Photosystem II reaction center protein I

3D Structure

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Related Domains

Browse other domains in PsbI →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction center protein I, PsbI(5035)

HH-groupPhotosystem II reaction center protein I, PsbI(5035.1)

TT-groupPhotosystem II reaction center protein I, PsbI(5035.1.1)

FFamilyPsbI(5035.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
Digalactosyl Diacyl Glycerol (Dgdg)

Pfam Families

Photosystem II reaction centre I protein (PSII 4.8 kDa protein)

External Links

ECOD PDB View: 6W1Q RCSB PDB: 6W1Q PDBe: 6W1Q UniProt: Q8DJZ6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB03426

Stearic acidSTE

drugDrugBank DB03193

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

Shown in the structure viewer. Drug annotations from DrugDomain.