ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6xgsB1 - ECOD Domain | ECOD

ECOD/Domains/e6xgsB1

e6xgsB1

UID: 002640780

PDB

Range: B:0-293
PDB: 6XGS chain B(all domains)
UniProt: Q8G1R0 (all domains)
Gene: dapA

Molecule: 4-hydroxy-tetrahydrodipicolinate synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in DHDPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHDPS(2002.1.1.29)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Citric acid, Phosphate ion)

Citric acidCIT
DrugBank DB04272
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Dihydrodipicolinate synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6XGS RCSB PDB: 6XGS PDBe: 6XGS UniProt: Q8G1R0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure