ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xgsC1 - ECOD Domain | ECOD

ECOD/Domains/e6xgsC1

e6xgsC1

UID: 002640781

PDB

Range: C:0-293
PDB: 6XGS chain C(all domains)
UniProt: Q8G1R0 (all domains)
Gene: dapA

Molecule: 4-hydroxy-tetrahydrodipicolinate synthase

3D Structure

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Related Domains

Browse other domains in DHDPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHDPS(2002.1.1.29)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Citric acid, Phosphate ion)

Citric acidCIT
DrugBank DB04272
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Dihydrodipicolinate synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6XGS RCSB PDB: 6XGS PDBe: 6XGS UniProt: Q8G1R0

Downloads

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