ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6z3jC1 - ECOD Domain | ECOD

ECOD/Domains/e6z3jC1

e6z3jC1

UID: 002641840

PDB

Range: C:53-127
PDB: 6Z3J chain C(all domains)
UniProt: Q6NW40 (all domains)
Gene: RGMB

Molecule: RGM domain family member B

3D Structure

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Related Domains

Browse other domains in RGM_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSpectrin repeat-like(604)

HH-groupRepulsive guidance molecule (RGM) N-terminal domain(604.33)

TT-groupRepulsive guidance molecule (RGM) N-terminal domain(604.33.1)

FFamilyRGM_N(604.33.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Pfam Families

Repulsive guidance molecule (RGM) N-terminal domain

External Links

ECOD PDB View: 6Z3J RCSB PDB: 6Z3J PDBe: 6Z3J UniProt: Q6NW40

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.