ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6z3jD1 - ECOD Domain | ECOD

ECOD/Domains/e6z3jD1

e6z3jD1

UID: 002641841

PDB

Range: D:52-127
PDB: 6Z3J chain D(all domains)
UniProt: Q6NW40 (all domains)
Gene: RGMB

Molecule: RGM domain family member B

3D Structure

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Related Domains

Browse other domains in RGM_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSpectrin repeat-like(604)

HH-groupRepulsive guidance molecule (RGM) N-terminal domain(604.33)

TT-groupRepulsive guidance molecule (RGM) N-terminal domain(604.33.1)

FFamilyRGM_N(604.33.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Chloride ionCL

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOL

Pfam Families

Repulsive guidance molecule (RGM) N-terminal domain

External Links

ECOD PDB View: 6Z3J RCSB PDB: 6Z3J PDBe: 6Z3J UniProt: Q6NW40

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.