ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6s63A1 - ECOD Domain | ECOD

ECOD/Domains/e6s63A1

e6s63A1

UID: 002642558

PDB

Range: A:7-247
PDB: 6S63 chain A(all domains)
UniProt: P96787 (all domains)
Gene: aop3

Molecule: Archaerhodopsin-3

3D Structure

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Related Domains

Browse other domains in Bac_rhodopsin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamilyBac_rhodopsin(5001.1.1.6)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
nonaneDD9

Pfam Families

PF01036Bac_rhodopsin

Bacteriorhodopsin-like protein

ClanCL0192GPCR_A

External Links

ECOD PDB View: 6S63 RCSB PDB: 6S63 PDBe: 6S63 UniProt: P96787

Downloads

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Sodium ionNA

metal

HexadecaneR16

RetinalRET

Shown in the structure viewer. Drug annotations from DrugDomain.