ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xvfD1 - ECOD Domain | ECOD

ECOD/Domains/e6xvfD1

e6xvfD1

UID: 002642709

PDB

Range: D:2-195
PDB: 6XVF chain D(all domains)
UniProt: P00125 (all domains)
Gene: CYC1

Molecule: Cytochrome c1, heme protein, mitochondrial

3D Structure

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Related Domains

Browse other domains in Cytochrom_C1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C1(107.1.1.2)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

PF02167Cytochrom_C1

Cytochrome C1 family

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 6XVF RCSB PDB: 6XVF PDBe: 6XVF UniProt: P00125

Downloads

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Drug annotations from DrugDomain.