ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yj4M1 - ECOD Domain | ECOD

ECOD/Domains/e6yj4M1

e6yj4M1

UID: 002644093

PDB

Range: M:1-486
PDB: 6YJ4 chain M(all domains)
UniProt: Q9B6D6 (all domains)
Gene: ND4

Molecule: NADH-ubiquinone oxidoreductase chain 4

3D Structure

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Related Domains

Browse other domains in Proton_antipo_M →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium/proton antiporter subunits-like(3281)

HH-groupSodium/proton antiporter subunits-like(3281.1)

TT-groupNADH-quinone oxidoreductase subunit L (NuoL)-related(3281.1.1)

FFamilyProton_antipo_M(3281.1.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
Diundecyl Phosphatidyl CholinePLC
drugDrugBank DB02777

Pfam Families

PF00361Proton_antipo_M

NADH:quinone oxidoreductase/Mrp antiporter, TM

ClanCL0425ComplexI-N

External Links

ECOD PDB View: 6YJ4 RCSB PDB: 6YJ4 PDBe: 6YJ4 UniProt: Q9B6D6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-Distearoyl-sn-glycerophosphoethanolamine

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.