ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yj4P1 - ECOD Domain | ECOD

ECOD/Domains/e6yj4P1

e6yj4P1

UID: 002644095

PDB

Range: P:21-354
PDB: 6YJ4 chain P(all domains)
UniProt: Q6C7X4 (all domains)
Gene: YALI0_D24585g

Molecule: Subunit NUEM of NADH:Ubiquinone Oxidoreductase (Complex I)

3D Structure

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Related Domains

Browse other domains in Epimerase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyEpimerase(2003.1.1.20)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
NADPHNDP
drugDrugBank DB02338

Pfam Families

PF01370Epimerase

NAD dependent epimerase/dehydratase family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6YJ4 RCSB PDB: 6YJ4 PDBe: 6YJ4 UniProt: Q6C7X4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Diundecyl Phosphatidyl Choline

drugDrugBank DB02777

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE

Shown in the structure viewer. Drug annotations from DrugDomain.