ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yxiA1 - ECOD Domain | ECOD

ECOD/Domains/e6yxiA1

e6yxiA1

UID: 002644551

PDB

Range: A:88-452
PDB: 6YXI chain A(all domains)
UniProt: Q6P988 (all domains)
Gene: NOTUM

Molecule: Palmitoleoyl-protein carboxylesterase NOTUM

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta-Hydrolases(7579)

HH-groupalpha/beta-Hydrolases(7579.1)

TT-groupalpha/beta-Hydrolases(7579.1.1)

FFamilyPAE(7579.1.1.22)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
1-(3-chlorophenyl)-2,5-dimethyl-pyrrole-3-carboxylic acidPZ8

+ 3 additives (Dimethyl sulfoxide, Sulfate ion, 1,2-ETHANEDIOL)

Pfam Families

Pectinacetylesterase

ClanCL0028AB_hydrolase

External Links

ECOD PDB View: 6YXI RCSB PDB: 6YXI PDBe: 6YXI UniProt: Q6P988

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxide

DrugBank DB01093

Sulfate ionSO4

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.