ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6k0rH3 - ECOD Domain | ECOD

ECOD/Domains/e6k0rH3

e6k0rH3

UID: 002646017

PDB

Range: H:5-249,H:272-364
PDB: 6K0R chain H(all domains)
UniProt: Q9Y265 (all domains)
Gene: RUVBL1

Molecule: RuvB-like 1,RuvB-like 1

3D Structure

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Related Domains

Browse other domains in AAA, TIP49 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA, TIP49(2004.1.1.420)

Ligands

in contact, ≤ 4 Å

[(2~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-2-yl]methyl phosphono hydrogen phosphateCUU
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

ATPase family associated with various cellular activities (AAA)

ClanCL0023P-loop_NTPase

TIP49 P-loop domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6K0R RCSB PDB: 6K0R PDBe: 6K0R UniProt: Q9Y265

Downloads

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