ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vbnB1 - ECOD Domain | ECOD

ECOD/Domains/e6vbnB1

e6vbnB1

UID: 002646355

PDB

Range: B:40-382
PDB: 6VBN chain B(all domains)
UniProt: P48775 (all domains)
Gene: TDO2

Molecule: Tryptophan 2,3-dioxygenase

3D Structure

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Related Domains

Browse other domains in Trp_dioxygenase →

Classification

AArchitecturealpha bundles(a.7)

XX-groupIndolic compounds 2,3-dioxygenase-like(4229)

HH-groupIndolic compounds 2,3-dioxygenase-like(4229.1)

TT-groupIndolic compounds 2,3-dioxygenase-like(4229.1.1)

FFamilyTrp_dioxygenase(4229.1.1.2)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
1,5-anhydro-2,3-dideoxy-3-[(5S)-5H-imidazo[5,1-a]isoindol-5-yl]-D-threo-pentitolQVY

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03301Trp_dioxygenase

Tryptophan 2,3-dioxygenase

ClanCL0380IDO-like

External Links

ECOD PDB View: 6VBN RCSB PDB: 6VBN PDBe: 6VBN UniProt: P48775

Downloads

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