ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vh6B1 - ECOD Domain | ECOD

ECOD/Domains/e6vh6B1

e6vh6B1

UID: 002646362

PDB

Range: B:474-607
PDB: 6VH6 chain B(all domains)
UniProt: P03211 (all domains)
Gene: EBNA1

Molecule: Epstein-Barr nuclear antigen 1

3D Structure

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Related Domains

Browse other domains in EBV-NA1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupViral DNA-binding domain(304.15)

TT-groupViral DNA-binding domain(304.15.1)

FFamilyEBV-NA1(304.15.1.2)

Ligands

in contact, ≤ 4 Å

4-hydroxy-6-methyl-2H-1-benzopyran-2-oneQX4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02905EBV-NA1

Epstein Barr virus nuclear antigen-1, DNA-binding domain

External Links

ECOD PDB View: 6VH6 RCSB PDB: 6VH6 PDBe: 6VH6 UniProt: P03211

Downloads

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