ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ynfB1 - ECOD Domain | ECOD

ECOD/Domains/e6ynfB1

e6ynfB1

UID: 002646462

PDB

Range: B:152-315
PDB: 6YNF chain B(all domains)
UniProt: P04406 (all domains)
Gene: GAPDH

Molecule: Glyceraldehyde-3-phosphate dehydrogenase

3D Structure

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Related Domains

Browse other domains in Gp_dh_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyGp_dh_C(298.1.1.7)

Ligands

in contact, ≤ 4 Å

3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOLXPE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02800Gp_dh_C

Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 6YNF RCSB PDB: 6YNF PDBe: 6YNF UniProt: P04406

Downloads

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