ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ywlE1 - ECOD Domain | ECOD

ECOD/Domains/e6ywlE1

e6ywlE1

UID: 002646497

PDB

Range: E:0-171
PDB: 6YWL chain E(all domains)
UniProt: P0DTD1 (all domains)
Gene: rep

Molecule: NSP3 macrodomain

3D Structure

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Related Domains

Browse other domains in Macro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMacro domain-like(7529)

HH-groupMacro domain-like(7529.1)

TT-groupMacro domain-like(7529.1.1)

FFamilyMacro(7529.1.1.1)

Ligands

in contact, ≤ 4 Å

ADENOSINE-5-DIPHOSPHORIBOSEAPR
Magnesium ionMG
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

Macro domain

ClanCL0223MACRO

External Links

ECOD PDB View: 6YWL RCSB PDB: 6YWL PDBe: 6YWL UniProt: P0DTD1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.