ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ywmC1 - ECOD Domain | ECOD

ECOD/Domains/e6ywmC1

e6ywmC1

UID: 002646500

PDB

Range: C:1-169
PDB: 6YWM chain C(all domains)
UniProt: P0DTD1 (all domains)
Gene: rep

Molecule: NSP3 macrodomain

3D Structure

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Related Domains

Browse other domains in Macro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMacro domain-like(7529)

HH-groupMacro domain-like(7529.1)

TT-groupMacro domain-like(7529.1.1)

FFamilyMacro(7529.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 2 additives (2-(N-morpholino)ethanesulfonic acid, 1,2-ETHANEDIOL)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Pfam Families

Macro domain

ClanCL0223MACRO

External Links

ECOD PDB View: 6YWM RCSB PDB: 6YWM PDBe: 6YWM UniProt: P0DTD1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.