ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qzcBBB2 - ECOD Domain | ECOD

ECOD/Domains/e6qzcBBB2

e6qzcBBB2

UID: 002647378

PDB

Range: BBB:0-91
PDB: 6QZC chain BBB(all domains)
UniProt: P01911 (all domains)
Gene: HLA-DRB1

Molecule: HLA class II histocompatibility antigen, DRB1-1 beta chain

3D Structure

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Related Domains

Browse other domains in MHC_II_beta →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_II_beta(233.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Sulfate ion, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

PF00969MHC_II_beta

Class II histocompatibility antigen, beta domain

ClanCL0343MHC

External Links

ECOD PDB View: 6QZC RCSB PDB: 6QZC PDBe: 6QZC UniProt: P01911

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.