ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xfsD1 - ECOD Domain | ECOD

ECOD/Domains/e6xfsD1

e6xfsD1

UID: 002647817

PDB

Range: D:88-251
PDB: 6XFS chain D(all domains)
UniProt: P00811 (all domains)
Gene: ampC

Molecule: Beta-lactamase

3D Structure

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Related Domains

Browse other domains in Beta-lactamase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyBeta-lactamase(4019.1.1.1)

Ligands

in contact, ≤ 4 Å

(3S)-3-(dioxidosulfanyl)-N-[(1Z)-3-oxoprop-1-en-1-yl]-4-(1H-1,2,3-triazol-1-yl)-D-valineTBE
drugDrugBank DB03834

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE

Pfam Families

PF00144Beta-lactamase

Beta-lactamase

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 6XFS RCSB PDB: 6XFS PDBe: 6XFS UniProt: P00811

Downloads

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DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.