ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jgcA1 - ECOD Domain | ECOD

ECOD/Domains/e6jgcA1

e6jgcA1

UID: 002648510

PDB

Range: A:-3-388
PDB: 6JGC chain A(all domains)
UniProt: Q9XEI3 (all domains)
Gene: LOC123452238

Molecule: BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_3 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_3(2002.1.1.39)

Ligands

in contact, ≤ 4 Å

alpha-D-glucopyranoseGLC
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

+ 3 additives (Glycerin, Sulfate ion, Pentaethylene glycol)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF00933Glyco_hydro_3

Glycosyl hydrolase family 3 N terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6JGC RCSB PDB: 6JGC PDBe: 6JGC UniProt: Q9XEI3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.