ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jgqA2 - ECOD Domain | ECOD

ECOD/Domains/e6jgqA2

e6jgqA2

UID: 002648529

PDB

Range: A:-3-388
PDB: 6JGQ chain A(all domains)
UniProt: Q9XEI3 (all domains)
Gene: LOC123452238

Molecule: BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_3 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_3(2002.1.1.39)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

+ 2 additives (Sulfate ion, Glycerol)

Sulfate ionSO4
DrugBank DB14546
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00933Glyco_hydro_3

Glycosyl hydrolase family 3 N terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6JGQ RCSB PDB: 6JGQ PDBe: 6JGQ UniProt: Q9XEI3

Downloads

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