ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6saqD2 - ECOD Domain | ECOD

ECOD/Domains/e6saqD2

e6saqD2

UID: 002650909

PDB

Range: D:3-29,D:250-327
PDB: 6SAQ chain D(all domains)
UniProt: O66841 (all domains)
Gene: nuoF

Molecule: NADH-quinone oxidoreductase subunit F

3D Structure

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Related Domains

Browse other domains in SLBB →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupNqo1 middle domain-like(221.1.4)

FFamilySLBB(221.1.4.1)

Ligands

in contact, ≤ 4 Å

[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[[(1~{E},3~{Z})-5-azanyl-4-oxidanyl-5-oxidanylidene-penta-1,3-dienyl]-methanoyl-amino]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphateL3W

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

SLBB domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 6SAQ RCSB PDB: 6SAQ PDBe: 6SAQ UniProt: O66841

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.