ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6scyB3 - ECOD Domain | ECOD

ECOD/Domains/e6scyB3

e6scyB3

UID: 002650946

PDB

Range: B:33-279
PDB: 6SCY chain B(all domains)
UniProt: Q6LXJ4 (all domains)
Gene: MMP1356

Molecule: [4Fe-4S]-dependent U34-ARNt thiolase

3D Structure

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Related Domains

Browse other domains in ATP_bind_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyATP_bind_3(2005.1.1.11)

Ligands

in contact, ≤ 4 Å

Iron/sulfur clusterSF4
Zinc ionZN
metalwithin 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

PF01171ATP_bind_3

PP-loop domain

ClanCL0039HUP

External Links

ECOD PDB View: 6SCY RCSB PDB: 6SCY PDBe: 6SCY UniProt: Q6LXJ4

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.