ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6skmE1 - ECOD Domain | ECOD

ECOD/Domains/e6skmE1

e6skmE1

UID: 002651125

PDB

Range: E:147-220
PDB: 6SKM chain E(all domains)
UniProt: P04585 (all domains)
Gene: gag-pol

Molecule: Gag protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Gag_p24_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyGag_p24_C(170.1.1.5)

Pfam Families

PF19317Gag_p24_C

Gag protein p24 C-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 6SKM RCSB PDB: 6SKM PDBe: 6SKM UniProt: P04585

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure