ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6tbfD2 - ECOD Domain | ECOD

ECOD/Domains/e6tbfD2

e6tbfD2

UID: 002651453

PDB

Range: D:36-415
PDB: 6TBF chain D(all domains)
UniProt: B3PBE0 (all domains)
Gene: bgl35A

Molecule: Beta-galactosidase, putative, bgl35A

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_42 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_42(2002.1.1.94)

Ligands

in contact, ≤ 4 Å

(1~{S},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-5-(octylamino)cyclopentane-1,2,3-triolN0T
Sodium ionNA
metal

+ 1 additive (Acetate)

AcetateACT

Pfam Families

PF02449Glyco_hydro_42

Beta-galactosidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6TBF RCSB PDB: 6TBF PDBe: 6TBF UniProt: B3PBE0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.