ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6tbiC1 - ECOD Domain | ECOD

ECOD/Domains/e6tbiC1

e6tbiC1

UID: 002651498

PDB

Range: C:34-415
PDB: 6TBI chain C(all domains)
UniProt: B3PBE0 (all domains)
Gene: bgl35A

Molecule: Beta-galactosidase, putative, bgl35A

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_42 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_42(2002.1.1.94)

Ligands

in contact, ≤ 4 Å

(1S,2S,3S,6R)-4-(hydroxymethyl)-6-(octylamino)cyclohex-4-ene-1,2,3-triolN8V
Sodium ionNA
metal

+ 1 additive (Acetate)

AcetateACT

Pfam Families

PF02449Glyco_hydro_42

Beta-galactosidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6TBI RCSB PDB: 6TBI PDBe: 6TBI UniProt: B3PBE0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.